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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13436823_13437169_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13436823 - 13437169

Intron Length:

347

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGCCCC

5'SS Class:

major

3'SS Sequence:

TTTCCTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTGAC

U12 Branch Point Sequence:

ATTTCCTGCAGT

Flanking Amino Acid:

PLSSAREAHLKRTAFSEKPV

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

63.5

41.4

Major BPS

62.5

0.31

1.1

54.8

42.1

Major PPT

85.1

0.79

0.6

81.4

23.6

Minor 5ss

40.8

-1

52.8

Minor BPS

53.1

0.18

2.2

79.25

42.7

Associated Gene:

Gene:

MMAB

Ensembl Gene ID:

ENSAPLG00000005263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005430

13435278 - 13438533

3256