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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13447148_13447978_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
13447148 - 13447978

Intron Length:
831

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTACGTGCG

5'SS Class:
major

3'SS Sequence:
TGTTTCACTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTCAC

U12 Branch Point Sequence:
ATGTGTTTCACT

Flanking Amino Acid:
SGVDNAVGTWGGALRYQSGK

Intron Amino Acid Position:
178

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.7
0.58
1.1
60.8
44.2

Major BPS
72.3
0.55
1.2
77.4
37.4

Major PPT
77.8
0.62
0.8
75.5
34.3

Minor 5ss
31.5
-2.1
3.2
32.6
42.1

Minor BPS
50.6
0.1
2.2
73.52
43.9

Associated Gene:

Gene:
MVK

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13443497 - 13452545
9049

13443497 - 13452545
9049