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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13500690_13510784_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13500690 - 13510784

Intron Length:

10095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTGGT

5'SS Class:

major

3'SS Sequence:

TTTGCTCCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

TTTGCTCCTACA

Flanking Amino Acid:

CPNKALEPRKCETAAPMHSP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

69.1

41.9

Major BPS

55.9

0.15

1.2

Major PPT

83.4

0.75

0.8

77.1

31.7

Minor 5ss

36.4

-1.5

3.4

46.3

Minor BPS

44.7

-0.4

2.2

64.22

Associated Gene:

Gene:

FAM222A

Ensembl Gene ID:

ENSAPLG00000019911

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026430

13500549 - 13515023

14475