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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13518552_13518689_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13518552 - 13518689

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTCCCCGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTCCAT

U12 Branch Point Sequence:

GGTGGCTGAGGG

Flanking Amino Acid:

KESKHIWKLQWATTILDIER

Intron Amino Acid Position:

724

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

70.5

41.4

Major BPS

52.4

0.06

1.3

41.7

Major PPT

64.1

0.32

58.9

38.3

Minor 5ss

38.5

-1.3

2.9

47.2

Minor BPS

35.9

-1.2

2.2

37.56

44.5

Associated Gene:

Gene:

TRPV4

Ensembl Gene ID:

ENSAPLG00000005295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005486

13517469 - 13523099

5631