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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13519515_13519605_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13519515 - 13519605

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTGGG

5'SS Class:

major

3'SS Sequence:

TCCTCTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGGCAG

U12 Branch Point Sequence:

GTGGCTGGCAGT

Flanking Amino Acid:

FFIDGSFQLLYFIYSVLVIV

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

62.6

42.3

Major BPS

39.6

-0.6

1.7

46.5

Major PPT

84.1

0.77

0.7

76.4

32.2

Minor 5ss

33.9

-1.8

3.2

41.8

40.2

Minor BPS

33.1

-1.2

2.4

48.33

Associated Gene:

Gene:

TRPV4

Ensembl Gene ID:

ENSAPLG00000005295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005486

13517469 - 13523099

5631