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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13519942_13520016_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13519942 - 13520016

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

CCTTTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAC

U12 Branch Point Sequence:

ATGCCACTGACG

Flanking Amino Acid:

IAYYRPMEGPPPYPYTTTID

Intron Amino Acid Position:

485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

57.1

42.2

Major BPS

61.3

0.28

52.7

34.2

Major PPT

78.6

0.64

0.7

73.1

25.1

Minor 5ss

31.9

-2.1

2.9

41.7

37.6

Minor BPS

45.2

-0.5

52.78

41.5

Associated Gene:

Gene:

TRPV4

Ensembl Gene ID:

ENSAPLG00000005295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005486

13517469 - 13523099

5631