Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13529535_13529645_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13529535 - 13529645

Intron Length:

111

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCGGGGCAG

5'SS Class:

major

3'SS Sequence:

CGTGTCCCGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCGAC

U12 Branch Point Sequence:

CCCCCCCCGACG

Flanking Amino Acid:

SEPRALPARCGSQEARREEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.2

46.9

41.8

Major BPS

43.6

-0.4

1.2

35.4

32.1

Major PPT

63.9

0.31

58.4

38.4

Minor 5ss

12.5

-4.3

3.5

28.4

Minor BPS

41.8

-0.7

1.9

41.01

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038302

13529341 - 13533838

4498

ENSAPLT00000038127

13529341 - 13533838

4498