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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13530508_13530810_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

13530508 - 13530810

Intron Length:

303

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTCAATAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAC

U12 Branch Point Sequence:

ATATTTGTAACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

74.5

0.61

1.1

75.6

36.6

Major PPT

53.7

0.08

1.2

58.6

41.3

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

55.7

0.16

68.76

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006095

13529748 - 13533838

4091