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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13531952_13532220_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13531952 - 13532220

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGGA

5'SS Class:

strong_major

3'SS Sequence:

GGCTTTTTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAC

U12 Branch Point Sequence:

GCTTTTTTCAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

67.9

37.5

Major BPS

71.4

0.53

1.2

63.4

Major PPT

69.5

0.44

1.1

67.1

Minor 5ss

29.9

-2.3

3.3

35.5

43.1

Minor BPS

-0.3

1.9

52.19

42.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005875

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038127

13529341 - 13533838

4498

ENSAPLT00000006095

13529748 - 13533838

4091

ENSAPLT00000038302

13529341 - 13533838

4498