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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13538947_13543797_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13538947 - 13543797

Intron Length:

4851

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCGT

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

GTCTCCACACAA

Flanking Amino Acid:

LRAAQENKHDSYIPCSERIH

Intron Amino Acid Position:

553

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

73.4

43.3

Major BPS

66.1

0.4

31.5

Major PPT

87.9

0.85

0.7

83.3

Minor 5ss

32.5

-2

3.4

47.7

47.8

Minor BPS

42.6

-0.5

2.1

54.85

43.3

Associated Gene:

Gene:

GIT2

Ensembl Gene ID:

ENSAPLG00000006006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017606

13536947 - 13561107

24161

ENSAPLT00000006333

13537938 - 13561107

23170