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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13546633_13547885_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13546633 - 13547885

Intron Length:

1253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCATTTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

TCTTTCCCATTT

Flanking Amino Acid:

ITRLQPFPPHIGRSAFVTSS

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

85.3

25.4

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

79.4

0.66

0.8

77.5

Minor 5ss

37.5

-1.4

2.8

46.9

41.8

Minor BPS

-0.2

68.16

43.2

Associated Gene:

Gene:

GIT2

Ensembl Gene ID:

ENSAPLG00000006006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032351

13536947 - 13561827

24881

ENSAPLT00000017606

13536947 - 13561107

24161