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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13556279_13556586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13556279 - 13556586

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAGGC

5'SS Class:

major

3'SS Sequence:

CTGTGTAAACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TTTTTTTGTATG

Flanking Amino Acid:

SNGKTPVDYARQGGHHELAE

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

57.6

40.5

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

60.1

0.23

1.1

52.6

45.1

Minor 5ss

28.7

-2.4

3.6

41.3

45.4

Minor BPS

49.6

-0.1

1.8

63.05

39.8

Associated Gene:

Gene:

GIT2

Ensembl Gene ID:

ENSAPLG00000006006

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040483

13537938 - 13561827

23890

ENSAPLT00000032351

13536947 - 13561827

24881

ENSAPLT00000017606

13536947 - 13561107

24161

ENSAPLT00000006333

13537938 - 13561107

23170

ENSAPLT00000044135

13536947 - 13561107

24161