Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13561935_13563707_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13561935 - 13563707

Intron Length:

1773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

GGGTACTCAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CATTGCTTATCT

Flanking Amino Acid:

RRLDQELHGQDVDQRDPRGR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

58.8

0.2

1.1

51.4

42.5

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

57.7

0.32

2.1

76.85

45.5

Associated Gene:

Gene:

ANKRD13A

Ensembl Gene ID:

ENSAPLG00000007138

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007446

13561848 - 13572966

11119