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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13607371_13607852_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13607371 - 13607852

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

GGATCTCTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CCATGCTCACCT

Flanking Amino Acid:

DSPTKRPALCIQKRHSSGSM

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.4

0.41

1.1

56.1

43.1

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

72.4

0.51

62.2

44.1

Minor 5ss

28.6

-2.5

3.1

31.9

42.5

Minor BPS

44.6

-0.3

2.2

60.42

48.8

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035237

13590179 - 13622123

31945

ENSAPLT00000023731

13590179 - 13622123

31945

ENSAPLT00000010145

13590179 - 13622123

31945