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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13608256_13609255_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13608256 - 13609255

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACTGGC

5'SS Class:

major

3'SS Sequence:

ACTTGGGCATCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

GAGTTCTTGACT

Flanking Amino Acid:

GSVGDLDYEKSLSSKTSQCQ

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

66.6

39.6

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

59.4

0.21

1.1

55.5

44.1

Minor 5ss

33.1

-1.9

3.2

43.9

Minor BPS

69.8

0.71

1.2

76.27

40.4

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035237

13590179 - 13622123

31945

ENSAPLT00000023731

13590179 - 13622123

31945