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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13608256_13609950_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13608256 - 13609950

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGACTGGC

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAG

U12 Branch Point Sequence:

CACCCCAGAACT

Flanking Amino Acid:

GSVGDLDYEKSVYWDYAMTI

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.1

66.6

39.6

Major BPS

54.6

0.12

1.5

65.3

41.5

Major PPT

80.4

0.68

0.8

72.1

37.9

Minor 5ss

33.1

-1.9

3.2

43.9

Minor BPS

48.7

-0

1.8

64.88

44.7

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010145

13590179 - 13622123

31945