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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13610019_13610450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13610019 - 13610450

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGCTAATAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAC

U12 Branch Point Sequence:

TCTGCTGTCACT

Flanking Amino Acid:

EIVYLHCHQQVDSGGTVVLV

Intron Amino Acid Position:

367

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

62.6

0.31

1.2

66.7

39.9

Major PPT

63.3

0.3

58.2

37.3

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

46.5

-0.1

2.4

70.57

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035237

13590179 - 13622123

31945

ENSAPLT00000023731

13590179 - 13622123

31945

ENSAPLT00000010145

13590179 - 13622123

31945