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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13610615_13610809_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13610615 - 13610809

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCAGC

5'SS Class:

major

3'SS Sequence:

TTTTGTTCACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAA

U12 Branch Point Sequence:

TTTTGTTCACCA

Flanking Amino Acid:

DPPLWSQRGKGKVFPKLRKR

Intron Amino Acid Position:

422

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

1.1

67.1

44.6

Major BPS

72.1

0.55

1.2

63.4

44.3

Major PPT

80.7

0.69

0.9

74.7

Minor 5ss

38.3

-1.3

3.1

51.6

45.2

Minor BPS

49.2

-0

2.2

71.01

41.7

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023731

13590179 - 13622123

31945

ENSAPLT00000010145

13590179 - 13622123

31945

ENSAPLT00000035237

13590179 - 13622123

31945