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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13612198_13613110_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13612198 - 13613110

Intron Length:

913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAATGCAG

5'SS Class:

weak_major

3'SS Sequence:

TGCCCTCTTACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

TGCCCTCTTACA

Flanking Amino Acid:

LVALRATQHQLPQDLMDAQG

Intron Amino Acid Position:

546

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.4

0.13

1.2

46.3

43.4

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

78.8

0.65

0.8

71.9

32.7

Minor 5ss

32.2

-2

3.3

39.4

Minor BPS

46.5

-0.2

1.9

58.41

40.7

Associated Gene:

Gene:

SGSM1

Ensembl Gene ID:

ENSAPLG00000009722

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035237

13590179 - 13622123

31945