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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13667446_13699683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13667446 - 13699683

Intron Length:

32238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTGTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

ATTGTTTCCATT

Flanking Amino Acid:

RLLKFLQYLWDQLKQCFSRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

35.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

81.5

0.71

0.9

76.2

37.8

Minor 5ss

32.5

-2

3.1

33.3

41.7

Minor BPS

45.1

-0.3

1.9

65.22

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039479

13667395 - 13711643

44249