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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1367047_1395236_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1367047 - 1395236

Intron Length:

28190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATAATG

5'SS Class:

strong_major

3'SS Sequence:

CTTTGATATATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TTTCCTTTGATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

77.4

37.4

Major BPS

84.4

0.85

34.5

Major PPT

71.8

0.49

0.9

66.1

39.1

Minor 5ss

37.2

-1.5

49.1

46.7

Minor BPS

73.2

0.72

1.1

79.54

29.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012171

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022168

1144737 - 1395385

250649