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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13704019_13706064_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13704019 - 13706064

Intron Length:

2046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGAGTCAC

5'SS Class:

major

3'SS Sequence:

TTTCTTTTTATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGAAAA

U12 Branch Point Sequence:

TTTCTTTTTATA

Flanking Amino Acid:

EKTTDFSFIDQTTILDSSAL

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

70.4

35.5

Major BPS

0.2

1.2

65.3

38.6

Major PPT

91.1

0.92

0.6

87.8

22.4

Minor 5ss

31.5

-2.1

2.9

40.1

38.9

Minor BPS

58.7

0.27

1.5

71.67

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029878

13697980 - 13711643

13664

ENSAPLT00000018171

13682422 - 13711643

29222

ENSAPLT00000040372

13662771 - 13711643

48873

ENSAPLT00000039479

13667395 - 13711643

44249

ENSAPLT00000035420

13689407 - 13711643

22237