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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13707740_13708111_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13707740 - 13708111

Intron Length:

372

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTACTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTCTTCTTACTT

Flanking Amino Acid:

FPGMDPSVLKAQLRKRHESE

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

87.2

0.84

0.7

84.7

29.8

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

68.5

0.66

1.6

82.74

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029878

13697980 - 13711643

13664

ENSAPLT00000018171

13682422 - 13711643

29222

ENSAPLT00000040372

13662771 - 13711643

48873

ENSAPLT00000039479

13667395 - 13711643

44249

ENSAPLT00000035420

13689407 - 13711643

22237