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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13728858_13735922_F

Intron Information:

Intron Rank:

141426

Intron Class:

major

Intron Phase:

Intron Coordinates:

13728858 - 13735922

Intron Length:

7065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CTGCTGCTTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TGCTGCTTACAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

77.5

32.9

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

75.5

0.57

0.9

68.1

37.6

Minor 5ss

29.2

-2.4

2.9

35.3

41.5

Minor BPS

-0.4

2.2

52.97

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047808

13728314 - 13738860

10547