Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13737376_13737737_F

Intron Information:

Intron Rank:

141428

Intron Class:

major

Intron Phase:

Intron Coordinates:

13737376 - 13737737

Intron Length:

362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCAAT

5'SS Class:

strong_major

3'SS Sequence:

AAATCTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

AAACATTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

79.8

35.1

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

64.8

0.33

58.3

41.2

Minor 5ss

41.1

-1

2.9

57.5

46.8

Minor BPS

50.5

0.09

1.6

64.93

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026162

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047808

13728314 - 13738860

10547