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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13808306_13808977_F


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
13808306 - 13808977

Intron Length:
672

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTAAGGTCA

5'SS Class:
strong_major

3'SS Sequence:
GTAAATACTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
ATTTTTGTAAAT

Flanking Amino Acid:
WTIYTKKHKLQNLLTMEQIV

Intron Amino Acid Position:
608

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.2
0.76
0.9
71.1
35.1

Major BPS
100
1.24
0.5
100
0

Major PPT
64.2
0.32
1.1
55.2
44.1

Minor 5ss
37.2
-1.5
3.2
44.7
44.3

Minor BPS
55.2
0.24
2.1
78.79
37.6

Associated Gene:

Gene:
GRK3

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

13758061 - 13809824
51764