Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13820770_13820890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13820770 - 13820890

Intron Length:

121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAACTCCT

5'SS Class:

major

3'SS Sequence:

CGTCTCGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATCAC

U12 Branch Point Sequence:

AGCCCCATCACC

Flanking Amino Acid:

WLLQRDGFTLATQLKPDVGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

66.6

44.7

Major BPS

53.4

0.09

1.1

57.3

37.7

Major PPT

75.5

0.57

0.9

68.7

37.2

Minor 5ss

42.9

-0.8

2.9

61.1

Minor BPS

46.4

-0.3

56.2

41.7

Associated Gene:

Gene:

MYO18B

Ensembl Gene ID:

ENSAPLG00000018788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039893

13819876 - 13856337

36462

ENSAPLT00000028857

13816092 - 13856337

40246