Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13833942_13833983_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13833942 - 13833983

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCAGCTGCA

5'SS Class:

major

3'SS Sequence:

GGGCTGACCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

GGGGGCTGACCG

Flanking Amino Acid:

PGGPGDISTLWGLLWILDEE

Intron Amino Acid Position:

480

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.1

0.38

1.3

64.5

38.2

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

55.9

0.13

47.2

40.3

Minor 5ss

26.9

-2.6

4.2

37.8

42.2

Minor BPS

38.2

-1

2.1

37.34

44.7

Associated Gene:

Gene:

MYO18B

Ensembl Gene ID:

ENSAPLG00000018788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023674

13821078 - 13836283

15206