Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13970466_13970935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13970466 - 13970935

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTATG

5'SS Class:

major

3'SS Sequence:

TGTTTTTGTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCATCAA

U12 Branch Point Sequence:

AGAGCATCAACA

Flanking Amino Acid:

VVDSEEEAEEEFQKELSQWR

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

76.3

38.9

Major BPS

49.5

-0

1.3

53.9

41.5

Major PPT

81.1

0.7

0.9

81.2

36.5

Minor 5ss

45.5

-0.5

2.5

59.8

44.7

Minor BPS

47.4

-0.2

1.9

57.52

41.1

Associated Gene:

Gene:

TFIP11

Ensembl Gene ID:

ENSAPLG00000012229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012761

13964790 - 13974248

9459