Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_13971064_13971566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

13971064 - 13971566

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCCA

5'SS Class:

major

3'SS Sequence:

CCTGTCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAC

U12 Branch Point Sequence:

TTCCCCTGATCT

Flanking Amino Acid:

PGKGLGKNAQGIINPIEAKQ

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

56.2

42.6

Major BPS

75.8

0.64

0.9

75.6

25.3

Major PPT

69.1

0.43

37.1

Minor 5ss

-2.3

3.4

40.2

45.3

Minor BPS

59.4

0.37

1.8

78.57

43.3

Associated Gene:

Gene:

TFIP11

Ensembl Gene ID:

ENSAPLG00000012229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012761

13964790 - 13974248

9459