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Intron Name: Anas_platyrhynchos_platyrhynchos_16_13973345_13974199_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

13973345 - 13974199

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCCGAC

U12 Branch Point Sequence:

GCCCCCCGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.4

0.95

0.8

78.1

36.3

Major BPS

43.6

-0.4

1.2

35.4

32.1

Major PPT

89.1

0.88

0.6

84.4

23.4

Minor 5ss

34.6

-1.8

3.2

49.1

46.6

Minor BPS

40.9

-0.7

1.9

46.2

42.1

Associated Gene:

Gene:

TFIP11

Ensembl Gene ID:

ENSAPLG00000012229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012761

13964790 - 13974248

9459