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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14519300_14521242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14519300 - 14521242

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTCCACTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAC

U12 Branch Point Sequence:

TTGCTCTGTATT

Flanking Amino Acid:

PGCHEFLAALGFDLCEVGQE

Intron Amino Acid Position:

1852

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

74.8

0.62

1.1

40.5

Major PPT

77.2

0.61

0.9

67.7

38.5

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

1.8

69.6

41.8

Associated Gene:

Gene:

TTC28

Ensembl Gene ID:

ENSAPLG00000009407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009814

14516352 - 14661973

145622

ENSAPLT00000043953

14516005 - 14661973

145969

ENSAPLT00000030822

14516005 - 14661922

145918