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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14521373_14524171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14521373 - 14524171

Intron Length:

2799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGTTACTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

GCATTGTTACTT

Flanking Amino Acid:

SETGEQLINRLHQVLVQLQA

Intron Amino Acid Position:

1772

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

0.62

1.4

85.7

34.9

Major PPT

84.7

0.78

0.8

82.1

34.6

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

45.1

-0.2

2.2

60.31

43.9

Associated Gene:

Gene:

TTC28

Ensembl Gene ID:

ENSAPLG00000009407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043953

14516005 - 14661973

145969

ENSAPLT00000030822

14516005 - 14661922

145918