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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14522063_14524171_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14522063 - 14524171

Intron Length:

2109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTTGG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCCTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCTTTGTTATTT

Flanking Amino Acid:

SETGEQLINRAVKNVVGMLH

Intron Amino Acid Position:

1801

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

69.7

43.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

64.9

0.34

1.1

64.5

36.9

Minor 5ss

39.2

-1.2

2.8

45.3

Minor BPS

50.3

0.09

2.3

74.56

43.3

Associated Gene:

Gene:

TTC28

Ensembl Gene ID:

ENSAPLG00000009407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009814

14516352 - 14661973

145622