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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14528591_14529678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14528591 - 14529678

Intron Length:

1088

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTGACAT

5'SS Class:

major

3'SS Sequence:

TTTCTCTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTGAA

U12 Branch Point Sequence:

GAGCATTGAAGC

Flanking Amino Acid:

SIQSLNPSSKSHVRKSTPAY

Intron Amino Acid Position:

1416

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.3

64.3

41.7

Major BPS

67.1

0.42

37.9

Major PPT

85.5

0.8

0.6

81.7

23.2

Minor 5ss

35.1

-1.7

3.1

47.9

47.6

Minor BPS

41.4

-0.6

1.7

43.82

36.9

Associated Gene:

Gene:

TTC28

Ensembl Gene ID:

ENSAPLG00000009407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030822

14516005 - 14661922

145918

ENSAPLT00000009814

14516352 - 14661973

145622

ENSAPLT00000043953

14516005 - 14661973

145969