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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14576332_14579146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14576332 - 14579146

Intron Length:

2815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

TTATGTATTTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTCCTTTATGT

Flanking Amino Acid:

VEAAMKSPMRESLEPTYQQL

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

74.6

37.4

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

76.9

0.61

0.9

74.9

39.6

Minor 5ss

37.6

-1.4

3.3

50.9

45.8

Minor BPS

59.4

0.37

1.9

81.06

40.9

Associated Gene:

Gene:

TTC28

Ensembl Gene ID:

ENSAPLG00000009407

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043953

14516005 - 14661973

145969

ENSAPLT00000030822

14516005 - 14661922

145918

ENSAPLT00000009814

14516352 - 14661973

145622