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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14670441_14671061_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14670441 - 14671061

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTACA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GATTAAT

U12 Branch Point Sequence:

ACCTGATTAATG

Flanking Amino Acid:

TMNPPQTSKMSATTRKRLHE

Intron Amino Acid Position:

492

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

75.1

34.3

Major BPS

0.6

1.2

75.9

36.3

Major PPT

87.1

0.83

0.7

86.1

27.7

Minor 5ss

42.2

-0.9

2.4

48.9

42.2

Minor BPS

46.8

-0.3

2.1

50.24

44.4

Associated Gene:

Gene:

CHEK2

Ensembl Gene ID:

ENSAPLG00000009586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010044

14669233 - 14689500

20268