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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14677169_14677395_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14677169 - 14677395

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATATATAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATAT

Flanking Amino Acid:

CWSLGVILFVCLCGYPPFNE

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

79.5

29.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.9

0.72

0.8

78.1

34.4

Minor 5ss

39.8

-1.1

3.2

53.2

Minor BPS

65.1

0.55

1.6

84.45

36.3

Associated Gene:

Gene:

CHEK2

Ensembl Gene ID:

ENSAPLG00000009586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034169

14673472 - 14687887

14416

ENSAPLT00000010044

14669233 - 14689500

20268