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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14681560_14683417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14681560 - 14683417

Intron Length:

1858

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTTTTTTTAATA

Flanking Amino Acid:

KFMASGIREANPAFNINTEI

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

0.85

0.9

39.9

Major PPT

86.6

0.82

0.7

85.3

27.9

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

82.2

1.01

0.9

86.33

25.3

Associated Gene:

Gene:

CHEK2

Ensembl Gene ID:

ENSAPLG00000009586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034169

14673472 - 14687887

14416

ENSAPLT00000010044

14669233 - 14689500

20268