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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14683527_14685646_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14683527 - 14685646

Intron Length:

2120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCATC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTCATGGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TAAGGATTAACA

Flanking Amino Acid:

EKYIMSKTLGSGACGEVKLA

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.8

85.3

32.2

Major BPS

87.6

0.93

0.9

89.3

Major PPT

66.3

0.37

62.8

38.3

Minor 5ss

43.9

-0.7

2.9

60.2

44.5

Minor BPS

48.7

-0.1

2.1

62.73

Associated Gene:

Gene:

CHEK2

Ensembl Gene ID:

ENSAPLG00000009586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034169

14673472 - 14687887

14416

ENSAPLT00000010044

14669233 - 14689500

20268