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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14687087_14687632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14687087 - 14687632

Intron Length:

546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

CTCTCTCCAATT

Flanking Amino Acid:

FALGKGFSNCDCVNDEYWFG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

0.9

75.8

33.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

85.7

0.8

0.7

80.5

24.8

Minor 5ss

42.3

-0.9

2.5

50.7

40.4

Minor BPS

0.01

1.9

68.25

43.4

Associated Gene:

Gene:

CHEK2

Ensembl Gene ID:

ENSAPLG00000009586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034169

14673472 - 14687887

14416

ENSAPLT00000010044

14669233 - 14689500

20268