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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14691174_14692030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14691174 - 14692030

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ATTTGTTTTACA

Flanking Amino Acid:

SLEETETLIKVKREELTKEV

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

38.1

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

86.4

0.82

0.8

80.4

36.6

Minor 5ss

38.2

-1.3

3.1

49.4

46.8

Minor BPS

56.5

0.2

2.1

73.19

38.6

Associated Gene:

Gene:

HSCB

Ensembl Gene ID:

ENSAPLG00000010206

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010631

14689521 - 14694089

4569