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Intron Name: Anas_platyrhynchos_platyrhynchos_16_14697672_14697781_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
14697672 - 14697781

Intron Length:
110

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGT|GTATGTACC

5'SS Class:
major

3'SS Sequence:
GTCTTACCCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATTAT

U12 Branch Point Sequence:
TATGTCTTACCC

Flanking Amino Acid:
ACECLTALTCGLLIDYVGRR

Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.9
0.4
1.1
64.4
39.8

Major BPS
75.9
0.64
1
66.1
40.5

Major PPT
68.4
0.42
0.8
62.3
33.8

Minor 5ss
45.1
-0.5
2.4
56.2
41.1

Minor BPS
60.7
0.31
1.7
70.71
40.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

14694773 - 14702058
7286