Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_14697893_14698437_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14697893 - 14698437

Intron Length:

545

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGATTT

5'SS Class:

major

3'SS Sequence:

CCTCCTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

CATTCTTTTATT

Flanking Amino Acid:

MGQQLSGINAIYFYATYIFE

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.9

35.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

80.6

0.69

0.7

76.1

25.9

Minor 5ss

46.8

-0.3

3.2

75.4

40.1

Minor BPS

63.5

0.51

1.6

76.34

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010777

14694773 - 14702058

7286