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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_14738473_14793069_F

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
14738473 - 14793069
Intron Length:
54597

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTGCTTATC
5'SS Class:
major
3'SS Sequence:
GATTCTGTTTCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTTAT
U12 Branch Point Sequence:
TTCTTATTGATT
Flanking Amino Acid:
LFFTLFETLEMHPLGLCNSN
Intron Amino Acid Position:
19

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.2
0.57
1
74.3
36
Major BPS
91.4
1.03
0.7
79.9
34.9
Major PPT
77.1
0.61
1
73.3
41.6
Minor 5ss
33.8
-1.8
3
45.5
42.6
Minor BPS
62.2
0.47
1.6
79.34
37.1

Associated Gene:

Gene:
ZNRF3
Ensembl Gene ID:
ENSAPLG00000010783
Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011229
14738159 - 14828790
90632