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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_14821246_14825550_F

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
14821246 - 14825550
Intron Length:
4305

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGAGCA
5'SS Class:
strong_major
3'SS Sequence:
TCTGTTGCTGTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TGTCCCTTTATC
Flanking Amino Acid:
KIKLKQRRSQELRVIPCTHR
Intron Amino Acid Position:
167

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.6
0.96
0.8
77.8
30
Major BPS
100
1.24
0.5
100
0
Major PPT
74.6
0.55
0.9
69.6
36.8
Minor 5ss
30.7
-2.2
3.3
39.5
45.9
Minor BPS
64.8
0.45
1.6
73.26
37.4

Associated Gene:

Gene:
ZNRF3
Ensembl Gene ID:
ENSAPLG00000010783
Chromosome:
16

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000011229
14738159 - 14828790
90632