Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_16_14891212_14891740_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

14891212 - 14891740

Intron Length:

529

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTACTAAA

5'SS Class:

major

3'SS Sequence:

TTCTGTAAACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TGTTCTGTAAAC

Flanking Amino Acid:

TFPYSGTWLSVHHSKVPDEE

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.9

0.52

1.3

75.3

36.2

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

66.7

0.38

1.1

60.2

Minor 5ss

36.9

-1.5

2.5

43.1

43.8

Minor BPS

56.4

0.18

2.1

72.23

38.8

Associated Gene:

Gene:

SUSD2

Ensembl Gene ID:

ENSAPLG00000010889

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011344

14870879 - 14894753

23875