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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1598483_1600969_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1598483 - 1600969

Intron Length:

2487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTAG

5'SS Class:

major

3'SS Sequence:

TTGCTGTTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAT

U12 Branch Point Sequence:

TTTGCTGTTACC

Flanking Amino Acid:

VLIPELCYLTGLTEKMRNDF

Intron Amino Acid Position:

397

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

60.1

41.3

Major BPS

76.7

0.66

1.2

77.9

34.9

Major PPT

73.1

0.52

66.3

44.1

Minor 5ss

34.4

-1.8

3.5

49.3

Minor BPS

48.4

-0.1

2.4

69.99

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038583

1588541 - 1616133

27593

ENSAPLT00000031579

1588541 - 1608658

20118

ENSAPLT00000012861

1588541 - 1608658

20118