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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1602434_1603048_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1602434 - 1603048

Intron Length:

615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TAATACAGAAAA

Flanking Amino Acid:

SMGIRMNKATMIEVDDRTEA

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

77.1

31.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.8

0.81

0.7

83.7

24.5

Minor 5ss

35.4

-1.7

3.2

46.1

42.2

Minor BPS

45.3

-0.3

1.9

58.75

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012861

1588541 - 1608658

20118

ENSAPLT00000038583

1588541 - 1616133

27593

ENSAPLT00000031579

1588541 - 1608658

20118