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Intron Name: Anas_platyrhynchos_platyrhynchos_16_1606459_1607653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1606459 - 1607653

Intron Length:

1195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTATTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTATAA

U12 Branch Point Sequence:

TTTTCTTCTATT

Flanking Amino Acid:

VVDVEVTRPEWYDFFIVSQA

Intron Amino Acid Position:

780

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

54.9

0.12

1.2

42.8

Major PPT

86.1

0.81

0.7

80.6

29.9

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

61.5

0.44

1.8

83.99

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038583

1588541 - 1616133

27593

ENSAPLT00000012861

1588541 - 1608658

20118